Uses of Class
pal.misc.MutableDouble
Packages that use MutableDouble
Package
Description
Classes that don't fit elsewhere ;^)
Classes describing substitution models, i.e.
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Uses of MutableDouble in pal.misc
Constructors in pal.misc with parameters of type MutableDouble -
Uses of MutableDouble in pal.substmodel
Methods in pal.substmodel that return MutableDoubleModifier and TypeMethodDescriptionstatic final MutableDouble
YangCodonModel.createKappaStore
(double initialValue) static final MutableDouble
YangCodonModel.createKappaStore
(double initialValue, String name) static final MutableDouble
YangCodonModel.createOmegaStore
(double initialValue) static final MutableDouble
YangCodonModel.createOmegaStore
(double initialValue, String name) Constructors in pal.substmodel with parameters of type MutableDoubleModifierConstructorDescriptionNeutralSelectionRateMatrixGroup
(MutableDouble kappaStore, double[] freqs, CodonTable table) PositiveSelectionRateMatrixGroup
(MutableDouble kappaStore, MutableDouble omegaStore, double[] freqs, CodonTable table)