Uses of Class
pal.substmodel.CodonModel
Packages that use CodonModel
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Uses of CodonModel in pal.substmodel
Subclasses of CodonModel in pal.substmodelModifier and TypeClassDescriptionclass
Yang's model of codon evolution More advanced codon Substitution Models (of Neilson and Yang) are now included (the M1, and M2 models).Methods in pal.substmodel that return CodonModelModifier and TypeMethodDescriptionstatic CodonModel
CodonModel.getInstance
(int modelID, double[] params, double[] freq) Create codon substitution model according to model type